<br><br><div class="gmail_quote">On Fri, Oct 19, 2012 at 10:51 AM, Carsten Kutzner <span dir="ltr"><<a href="mailto:ckutzne@gwdg.de" target="_blank">ckutzne@gwdg.de</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
<div class="im"><br>
On Oct 19, 2012, at 4:21 PM, Roland Schulz <<a href="mailto:roland@utk.edu">roland@utk.edu</a>> wrote:<br>
<br>
> Hi,<br>
><br>
> yes it should work. Is your version the latest 4.6 and contains Mark fix (<a href="https://gerrit.gromacs.org/#/c/1516/" target="_blank">https://gerrit.gromacs.org/#/c/1516/</a>)?<br>
</div>Yes, this is what happens if I get the newest version:<br>
<br>
=============================<br>
git clone git://<a href="http://git.gromacs.org/gromacs.git" target="_blank">git.gromacs.org/gromacs.git</a><br>
cd gromacs<br>
git checkout --track -b release-4-6 origin/release-4-6<br>
mkdir build<br>
cd build<br>
cmake .. -DCMAKE_INSTALL_PREFIX=/home/ckutzne/test<br>
make -j 4<br>
make install-mdrun<br>
<br>
[100%] Installing mdrun<br>
-- Install configuration: "Release"<br>
-- Install component: "libraries"<br>
CMake Error at /home/ckutzne/installations/gromacs/build/src/gmxlib/cmake_install.cmake:38 (FILE):<br>
file INSTALL cannot find<br>
"/home/ckutzne/installations/gromacs/build/src/gmxlib/CMakeFiles/CMakeRelink.dir/libgmx.so.6".<br>
Call Stack (most recent call first):<br>
/home/ckutzne/installations/gromacs/build/src/cmake_install.cmake:43 (INCLUDE)<br>
/home/ckutzne/installations/gromacs/build/cmake_install.cmake:39 (INCLUDE)<br>
<br>
<br>
make[3]: *** [src/kernel/CMakeFiles/install-mdrun] Error 1<br>
make[2]: *** [src/kernel/CMakeFiles/install-mdrun.dir/all] Error 2<br>
make[1]: *** [src/kernel/CMakeFiles/install-mdrun.dir/rule] Error 2<br>
make: *** [install-mdrun] Error 2<br>
=============================<br>
<br>
The CMakeRelink.dir directory is empty.<br></blockquote><div>No clue why it is trying to use the CMakeRelink directory. What cmake version and what operating system is that?</div><div>What does "grep RPATH CMakeCache.txt" give?</div>
<div><br></div><div>Roland</div><div><br></div><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
<br>
Carsten<br>
<div><div class="h5"><br>
<br>
><br>
> Roland<br>
><br>
> On Fri, Oct 19, 2012 at 9:51 AM, Carsten Kutzner <<a href="mailto:ckutzne@gwdg.de">ckutzne@gwdg.de</a>> wrote:<br>
> Hi,<br>
><br>
> is<br>
><br>
> cmake <options><br>
> make mdrun<br>
> make install-mdrun<br>
><br>
> supposed to work in 4.6? For me it is not, only make and make install work.<br>
><br>
> Carsten<br>
><br>
><br>
> --<br>
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><br>
><br>
><br>
><br>
><br>
><br>
><br>
> --<br>
> ORNL/UT Center for Molecular Biophysics <a href="http://cmb.ornl.gov" target="_blank">cmb.ornl.gov</a><br>
> <a href="tel:865-241-1537" value="+18652411537">865-241-1537</a>, ORNL PO BOX 2008 MS6309<br>
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<br>
<br>
--<br>
</div></div>Dr. Carsten Kutzner<br>
Max Planck Institute for Biophysical Chemistry<br>
Theoretical and Computational Biophysics<br>
Am Fassberg 11, 37077 Goettingen, Germany<br>
Tel. <a href="tel:%2B49-551-2012313" value="+495512012313">+49-551-2012313</a>, Fax: <a href="tel:%2B49-551-2012302" value="+495512012302">+49-551-2012302</a><br>
<a href="http://www.mpibpc.mpg.de/grubmueller/kutzner" target="_blank">http://www.mpibpc.mpg.de/grubmueller/kutzner</a><br>
<div class="HOEnZb"><div class="h5"><br>
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<br>
<br>
<br>
<br>
</div></div></blockquote></div><br><br clear="all"><div><br></div>-- <br>ORNL/UT Center for Molecular Biophysics <a href="http://cmb.ornl.gov">cmb.ornl.gov</a><br>865-241-1537, ORNL PO BOX 2008 MS6309<br>