On Sat, Oct 20, 2012 at 5:43 PM, Mirco Wahab <span dir="ltr"><<a href="mailto:wahab-mail@gmx.de" target="_blank">wahab-mail@gmx.de</a>></span> wrote:<br><div class="gmail_quote"><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
<div class="im">On 19.10.2012 16:51, Carsten Kutzner wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
Yes, this is what happens if I get the newest version:<br>
</blockquote>
<br></div>
I tested this on a fresh-set up SuSE 12.2 x64 having a workable<br>
CUDA5.0 installation - it installs fine under "some conditions".<br>
<br>
A newer cmake (2.8.9) came "accidentially" through <a href="http://build.opensuse.org/KDE" target="_blank">build.opensuse.org/KDE</a><br>
repository. The compiler is gcc 4.3.4.<br>
<br>
One has now explicitely(?) to disable GPU acceleration<br>
by -DGMX_GPU=OFF - is this correct?<br></blockquote><div><br></div><div>Yes, but not for long.</div><div> </div><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
gcc 4.3.4 CUDA5 build ok, full install ok (gpu build)<br>
<br>
gcc 4.7.2 CUDA5 build fail, -<br></blockquote><div><br></div><div>That's I assume because CUDA 5 is officially not compatible with gcc 4.7. It has worked for me se you can just edit cuda/include/host_config.h and it should all work fine.</div>
<div> </div><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
gcc 4.7.2 GMX_GPU=OFF build ok, install-mdrun fail (*)<br>
gcc 4.7.2 GMX_GPU=OFF build ok, full install ok (w/o gpu)<br>
<br>
icc 13.0.0 CUDA5 build fail, -<br></blockquote><div><br></div><div>That should work out of the box -- unless you're using an fftw that is older than 3.3.1. What error are yo getting?</div><div> </div><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
icc 13.0.0 GMX_GPU=OFF build ok, install-mdrun fail (*)<br>
icc 13.0.0 GMX_GPU=OFF build ok, full install ok (w/o gpu)<br>
<br>
* -<div class="im"><br>
[100%] Installing mdrun<br>
-- Install configuration: "Release"<br>
-- Install component: "libraries"<br></div>
CMake Error at /home/carlo/Software/Gromacs/<u></u>build/src/gromacs/cmake_<u></u>install.cmake:76 (FILE):<br>
file INSTALL cannot find<br>
<br>
"/home/carlo/Software/Gromacs/<u></u>build/src/gromacs/CMakeFiles/<u></u>CMakeRelink.dir/libgromacs.so.<u></u>6".<div class="im"><br>
Call Stack (most recent call first):<br></div>
/home/carlo/Software/Gromacs/<u></u>build/src/cmake_install.cmake:<u></u>51 (INCLUDE)<br>
/home/carlo/Software/Gromacs/<u></u>build/cmake_install.cmake:39 (INCLUDE)<div class="HOEnZb"><div class="h5"><br>
<br>
<br>
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