<div>What's your icc version? Perhaps the issue is related to this:</div><div><a href="http://software.intel.com/en-us/articles/use-intel-cc-compilers-v1201107-or-higher-version-to-resolve-error-when-preprocessing-and-then-compiling-c-language-code-which-included-mathh-or-mathimfh-header">http://software.intel.com/en-us/articles/use-intel-cc-compilers-v1201107-or-higher-version-to-resolve-error-when-preprocessing-and-then-compiling-c-language-code-which-included-mathh-or-mathimfh-header</a></div>
--<br>Szilárd<br>
<br><br><div class="gmail_quote">On Wed, Oct 24, 2012 at 2:46 PM, Carsten Kutzner <span dir="ltr"><<a href="mailto:ckutzne@gwdg.de" target="_blank">ckutzne@gwdg.de</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
<div text="#000000" bgcolor="#FFFFFF"><div class="im">
<div>On 10/24/2012 02:21 PM, Roland Schulz
wrote:<br>
</div>
<blockquote type="cite">
<br>
<br>
<div class="gmail_quote">On Wed, Oct 24, 2012 at 7:45 AM, Mirco
Wahab <span dir="ltr"><<a href="mailto:mirco.wahab@chemie.tu-freiberg.de" target="_blank">mirco.wahab@chemie.tu-freiberg.de</a>></span>
wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">Am
24.10.2012 13:02, schrieb Szilárd Páll:<br>
<div>> On 10/20/2012 07:46 PM, Szilárd Páll
wrote:<br>
>> On Sat, Oct 20, 2012 at 5:43 PM, Mirco Wahab <<a href="mailto:wahab-mail@gmx.de" target="_blank">wahab-mail@gmx.de</a>>
wrote:<br>
>><br>
</div>
<div>>> icc 13.0.0 CUDA5 build
fail, -<br>
>><br>
>><br>
>> That should work out of the box -- unless
you're using an fftw<br>
>> that is older than 3.3.1. What error are yo
getting?<br>
><br>
</div>
<div>> is icc 13 required for building 4.6
with GPU support or should icc<br>
> 12 do as well?<br>
><br>
> I'm ont entirely sure about the officially supported
versions, but both<br>
> 12 and 13 work fine.<br>
<br>
</div>
I retestet CUDA5 + icc13 on x64-Linux (OpenSuSE) and it builds<br>
perfectly, as you expected. My error from test before may have<br>
resulted from a unlucky combination of GMX_PREFER_STATIC_LIBS<br>
and BUILD_SHARED_LIBS in my build script.<br>
</blockquote>
<div>Any combination of these flags should work. Let us know if
you have some combination which reproducible fails.</div>
</div>
</blockquote></div>
Hi,<br>
<br>
I cannot get it compiled at all with icc, see below.<br>
<br>
Best,<br>
Carsten<br>
<br>
<br>
mkdir build<br>
cd build<br>
source /usr/local/intel/ics/compilerpro-12.0.0.084/bin/iccvars.sh
intel64<br>
export
ICC=/usr/local/intel/ics/composerxe-2011.0.084/bin/intel64/icc<br>
export
ICPC=/usr/local/intel/ics/composerxe-2011.0.084/bin/intel64/icpc<br>
module add MPIBPC/cuda-5.0.35<br>
<br>
cmake .. \<br>
-DCMAKE_C_COMPILER=$ICC \<br>
-DCMAKE_CXX_COMPILER=$ICPC<br>
<br>
<br>
[ 0%] Building NVCC (Device) object
src/gmxlib/cuda_tools/./cuda_tools_generated_pmalloc_cuda.cu.o<br>
/sw/cluster/intel/ics/composerxe-2011.0.084/compiler/include/math.h(235):
error: omission of exception specification is incompatible with
previous function "__isinff" <br>
/usr/local/cuda/cuda50/toolkit/5.0.35/include/math_functions.h(6073):
here<br>
<br>
/sw/cluster/intel/ics/composerxe-2011.0.084/compiler/include/math.h(236):
error: omission of exception specification is incompatible with
previous function "__isinf"<br>
/usr/local/cuda/cuda50/toolkit/5.0.35/include/math_functions.h(6087):
here<br>
<br>
/sw/cluster/intel/ics/composerxe-2011.0.084/compiler/include/math.h(238):
error: omission of exception specification is incompatible with
previous function "__isinfl"<br>
/usr/local/cuda/cuda50/toolkit/5.0.35/include/math_functions.h(6410):
here<br>
<br>
/sw/cluster/intel/ics/composerxe-2011.0.084/compiler/include/math.h(245):
error: omission of exception specification is incompatible with
previous function "__isnanf"<br>
/usr/local/cuda/cuda50/toolkit/5.0.35/include/math_functions.h(6074):
here<br>
<br>
/sw/cluster/intel/ics/composerxe-2011.0.084/compiler/include/math.h(246):
error: omission of exception specification is incompatible with
previous function "__isnan"<br>
/usr/local/cuda/cuda50/toolkit/5.0.35/include/math_functions.h(6086):
here<br>
<br>
/sw/cluster/intel/ics/composerxe-2011.0.084/compiler/include/math.h(248):
error: omission of exception specification is incompatible with
previous function "__isnanl"<br>
/usr/local/cuda/cuda50/toolkit/5.0.35/include/math_functions.h(6411):
here<br>
<br>
/sw/cluster/intel/ics/composerxe-2011.0.084/compiler/include/math.h(275):
error: omission of exception specification is incompatible with
previous function "__finitef"<br>
/usr/local/cuda/cuda50/toolkit/5.0.35/include/math_functions.h(6084):
here<br>
<br>
/sw/cluster/intel/ics/composerxe-2011.0.084/compiler/include/math.h(276):
error: omission of exception specification is incompatible with
previous function "__finite"<br>
/usr/local/cuda/cuda50/toolkit/5.0.35/include/math_functions.h(6083):
here<br>
<br>
/sw/cluster/intel/ics/composerxe-2011.0.084/compiler/include/math.h(278):
error: omission of exception specification is incompatible with
previous function "__finitel"<br>
/usr/local/cuda/cuda50/toolkit/5.0.35/include/math_functions.h(6409):
here<br>
<br>
/sw/cluster/intel/ics/composerxe-2011.0.084/compiler/include/math.h(285):
error: omission of exception specification is incompatible with
previous function "__signbitf"<br>
/usr/local/cuda/cuda50/toolkit/5.0.35/include/math_functions.h(6090):
here<br>
<br>
/sw/cluster/intel/ics/composerxe-2011.0.084/compiler/include/math.h(286):
error: omission of exception specification is incompatible with
previous function "__signbit"<br>
/usr/local/cuda/cuda50/toolkit/5.0.35/include/math_functions.h(6085):
here<br>
<br>
/sw/cluster/intel/ics/composerxe-2011.0.084/compiler/include/math.h(288):
error: omission of exception specification is incompatible with
previous function "__signbitl"<br>
/usr/local/cuda/cuda50/toolkit/5.0.35/include/math_functions.h(6403):
here<br>
<br>
/usr/include/c++/4.1.2/bits/cpp_type_traits.h(358): error: expected
an identifier<br>
<br>
/usr/include/c++/4.1.2/bits/cpp_type_traits.h(371): error: expected
an identifier<br>
<br>
14 errors detected in the compilation of
"/tmp/tmpxft_00000dbc_00000000-9_pmalloc_cuda.compute_30.cpp1.ii".<br>
CMake Error at
CMakeFiles/cuda_tools_generated_pmalloc_cuda.cu.o.cmake:256
(message):<br>
Error generating file<br>
/home/ckutzne/installations/gromacs/build/src/gmxlib/cuda_tools/./cuda_tools_generated_pmalloc_cuda.cu.o<br>
<br>
<br>
make[2]: ***
[src/gmxlib/cuda_tools/./cuda_tools_generated_pmalloc_cuda.cu.o]
Error 1<br>
make[1]: *** [src/gmxlib/cuda_tools/CMakeFiles/cuda_tools.dir/all]
Error 2<br>
make: *** [all] Error 2<div class="im"><br>
<br>
<br>
<br>
<blockquote type="cite">
<div class="gmail_quote">
<div>Roland </div>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
<br>
So all is ok now. Thanks!<br>
<span><font color="#888888"><br>
M.<br>
</font></span>
<div>
<div><br>
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