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<div class="moz-cite-prefix">OpenMP is fully automated for bondeds.
If you add a new bonded potential it is automatically parallelized
with OpenMP (it's magic!).<br>
<br>
Cheers,<br>
<br>
Berk<br>
<br>
On 11/03/14 22:52 , Roland Schulz wrote:<br>
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<div class="gmail_quote">On Tue, Mar 11, 2014 at 5:15 PM,
David van der Spoel <span dir="ltr"><<a
moz-do-not-send="true"
href="mailto:spoel@xray.bmc.uu.se" target="_blank">spoel@xray.bmc.uu.se</a>></span>
wrote:<br>
<blockquote class="gmail_quote" style="margin:0px 0px 0px
0.8ex;border-left-width:1px;border-left-color:rgb(204,204,204);border-left-style:solid;padding-left:1ex">How
can I program the bonded forces to work with openmp?<br>
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<div>The bonded forces are using openmp. Look for "#pragma
omp" in bondfree.c</div>
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<div>Roland</div>
<blockquote class="gmail_quote" style="margin:0px 0px 0px
0.8ex;border-left-width:1px;border-left-color:rgb(204,204,204);border-left-style:solid;padding-left:1ex"><br>
I grepped the code for GMX_OPENMP or nthreads_omp but
allmost nothing<br>
pops up. Any other keywords that I can grep for?<br>
<br>
Cheers,<br>
<span class=""><font color="#888888">--<br>
David van der Spoel, Ph.D., Professor of Biology<br>
Dept. of Cell & Molec. Biol., Uppsala University.<br>
Box 596, 75124 Uppsala, Sweden. Phone: <a
moz-do-not-send="true" href="tel:%2B46184714205"
value="+46184714205">+46184714205</a>.<br>
<a moz-do-not-send="true"
href="mailto:spoel@xray.bmc.uu.se">spoel@xray.bmc.uu.se</a>
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href="http://folding.bmc.uu.se" target="_blank">http://folding.bmc.uu.se</a><br>
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