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I have been working on adding my own residue to .rtp, with all the ffgmx*
files copied to a new force field.<br><br>
I managed now to get pdb2gmx to process a pdb file containing the residue
and spit out the .gro and .top files. However, the .top file does
not have the bond etc information in it. Any suggestions on why
this might be the case?<br><br>
Catch ya,<br>
<x-sigsep><p></x-sigsep>
<b>Dr. Dallas Warren<br>
</b><i>Research Fellow<br>
</i>Department of Pharmaceutical Biology and Pharmacology<br>
Victorian College of Pharmacy<br>
Monash University<br>
<font color="#0000FF"><u>dallas.warren@vcp.monash.edu.au<br>
</u></font>+61 3 9903 9076</html>