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<DIV><FONT face=Arial size=2>Yop, sorry I meant 1000 K. 10000 K is way too much.
</FONT></DIV>
<DIV><FONT face=Arial size=2></FONT> </DIV>
<DIV><FONT face=Arial size=2>Marco is right. With 11 residues it is unlikely
that your peptide has a unique</FONT></DIV>
<DIV><FONT face=Arial size=2>conformation in solvent. It probably explore
different conformations with diffenrent</FONT></DIV>
<DIV><FONT face=Arial size=2>probabilities. </FONT></DIV>
<DIV><FONT face=Arial size=2></FONT> </DIV>
<DIV><FONT face=Arial size=2>How did you generate your 10 structures with
Modeler. I thought it needed a</FONT></DIV>
<DIV><FONT face=Arial size=2>template !! And what isthe point of doing an SA on
a specific conformation ?</FONT></DIV>
<DIV><FONT face=Arial size=2>You loose it at 1000K anyway !! </FONT></DIV>
<DIV><FONT face=Arial size=2>I did some thing similar where I generated 100 conf
from SA with an implicit </FONT></DIV>
<DIV><FONT face=Arial size=2>solvent (faster) and after that I
made clusters of them. </FONT></DIV>
<DIV><FONT face=Arial size=2></FONT> </DIV>
<DIV><FONT face=Arial size=2>XAvier</FONT></DIV>
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