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Ok, thanks Xavier, but i read in some papers that they modify bond angles
and bond <br>
length, for give more "movility" to the system and guarantee a great SA.
How could ido this with<br>
gromacs<br>
<br>
<br>
Xavier Periole wrote:<br>
<blockquote type="cite" cite="mid005901c356bb$178178e0$d83a4a86@fox">
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<pre wrap="">What time is necesary for cooling a sistem? everybody say SLOWLY .
</pre>
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<pre wrap=""><!---->
Depends the type of system, its size, the purpose of the simulated
annealing.
But yes the slowest the better. At the origin the simulated annealing was
coupled to Monte Carlo simulation and in THEORY if you decrease the
temperature by steps infinitey small you get to the global minimum. Check
in a book or some papers using simulated annealing.
XAvier
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