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David van der Spoel wrote:<br>
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cite="mid1063357762.1751.9.camel@vangogh.bmc.uu.se">
<pre wrap="">On Fri, 2003-09-12 at 09:58, Lakshmi Padmavathi wrote:
</pre>
<blockquote type="cite">
<pre wrap="">Dear gromacs users,
i would like to make one building block for a abnormal residue (not usual
aminoacid but has aminoacid properties).
so,i creatred one building block. i inserted in ffgmx.rtp, ffgmx.hdb and in
aminoacids.dat. i am using ffgmx forcefield ( option "0" of the forcefield)
</pre>
</blockquote>
<pre wrap=""><!---->did you edit the files in the right location?
/usr/local/share etc.
IIRC there is also a hidden option -newrtp which will dump the rtp file
after reading, or you can try to use the -debug option which will print
loads of information to the pdb2gmx.log file.
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What's the function of a hidden option in a program??? This would help me
a lot if a knew this a month ago.<br>
<br>
[]'s<br>
<br>
<pre class="moz-signature" cols="$mailwrapcol">--
Alexandre Suman de Araujo
<a class="moz-txt-link-abbreviated" href="mailto:asaraujo@if.sc.usp.br">asaraujo@if.sc.usp.br</a>
UIN: 6194055
IFSC - USP - São Carlos - Brasil</pre>
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