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<pre>Dear GMX users and developers,</pre>
<pre>I'd like to simulate protein motions which will normally take longer than the scale of MD simulations.</pre>
<pre>Are such calculations feasible using the SD or BD algorithms in Gromacs?</pre>
<pre>Are you aware of any references to such calculations made using Gromacs?</pre>
<pre>Regarding SD - is it possible to divide the system to a region were full MD takes place and a region where SD is effective?</pre>
<pre></pre>
<pre>Thank you,</pre>
<pre>Ran.</pre>
<pre>--
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Ran Friedman
Laser laboratory for fast reactions in biology
Department of biochemistry
Faculty of life sciences
Tel-Aviv university
972-3-6409824
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