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I am running gmx 3.1.4. Can I stil kill mdrun with -USR1?<br>
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Martina<br>
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David van der Spoel wrote:<br>
<blockquote type="cite" cite="mid:1080027812.24185.5.camel@vangogh.bmc.uu.se">
<pre wrap="">On Mon, 2004-03-22 at 23:38, Martina Bertsch, PhD wrote:<br></pre>
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<pre wrap="">Dear gmx developers and users,<br><br>Our administrator is planning to bring down our Linux cluster for <br>upgrades later this week. I have an mdrun job that is running on the <br>cluster for about a month and a half, and will not be complete for at <br>least another month. Is there a special command to terminate an mdrun <br>job nicely? Is there a recommended kill command? I know how to restart <br>jobs that crashed, but I do not want to destabilize a perfectly running <br>job by intentionally crashing it.<br><br></pre>
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<pre wrap=""><!---->If this is gmx 3.2 or higher you can continue with binary precision<br>using tpbconv. You can kill the mdrun with -USR1 signal and it will<br>gracefully stop, even in parallel.<br><br></pre>
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<pre wrap=""> I was also wondering if anybody could share any experience using <br>GROMACS on a cluster with the Condor queuing system?<br><br></pre>
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<pre wrap=""><!----><br><br><br></pre>
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<pre wrap="">Best regards,<br>Martina Bertsch, Ph.D.<br><br>_______________________________________________<br>gmx-users mailing list<br><a class="moz-txt-link-abbreviated" href="mailto:gmx-users@gromacs.org">gmx-users@gromacs.org</a><br><a class="moz-txt-link-freetext" href="http://www.gromacs.org/mailman/listinfo/gmx-users">http://www.gromacs.org/mailman/listinfo/gmx-users</a><br>Please don't post (un)subscribe requests to the list. Use the <br>www interface or send it to <a class="moz-txt-link-abbreviated" href="mailto:gmx-users-request@gromacs.org">gmx-users-request@gromacs.org</a>.<br></pre>
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