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<DIV style="FONT: 10pt arial">----- Original Message ----- </DIV>
<DIV
style="BACKGROUND: #e4e4e4; FONT: 10pt arial; font-color: black"><B>From:</B>
<A title=sreeyapu@rediffmail.com href="mailto:sreeyapu@rediffmail.com">SLN
Prasad Reddy</A> </DIV>
<DIV style="FONT: 10pt arial"><B>To:</B> <A title=gmx-users@gromacs.org
href="mailto:gmx-users@gromacs.org">gmx-users@gromacs.org</A> </DIV>
<DIV style="FONT: 10pt arial"><B>Sent:</B> Monday, July 19, 2004 2:54 PM</DIV>
<DIV style="FONT: 10pt arial"><B>Subject:</B> [gmx-users] (no subject)</DIV>
<DIV><BR></DIV>
<P> <BR>Hello gromacs users,<BR> How long Position restrain run
will take for system having 55455 atoms. Kindly mail me. Many thanks in
advance<BR><BR>Prasad reddy. </P>
<DIV>
<DIV><FONT face=Arial size=2></FONT> </DIV>
<DIV><FONT face=Arial size=2>It depends on many factors: c</FONT><FONT
face=Arial size=2>omputer speed, and of course your run settings, namely the
step between integrations and the time lenght of your run.</FONT></DIV>
<DIV><FONT face=Arial size=2>Of course, a position restrained run generally
its not long, it depends on the user needs. If you just want to
accomodate the solvent around your solute, 20 ps could be enough, at
least for water.</FONT></DIV>
<DIV><FONT face=Arial size=2></FONT> </DIV>
<DIV><FONT face=Arial size=2>Regards,</FONT></DIV>
<DIV><FONT face=Arial size=2>Nuno</FONT></DIV>
<DIV><FONT face=Arial size=2></FONT> </DIV>
<DIV><FONT face=Arial size=2></FONT> </DIV>
<DIV><FONT face=Arial size=2></FONT> </DIV>
<DIV><FONT face=Arial size=2>######################################<BR>Nuno
Ricardo Santos Loureiro da Silva Ferreira<BR>Departamento de
Química<BR>Faculdade de Ciências e Tecnologia<BR>Universidade de
Coimbra<BR>3004-535 Coimbra - Portugal<BR>Fax: +351 239 827703 - <A
href="http://www.biolchem.qui.uc.pt">www.biolchem.qui.uc.pt</A><BR>########################################</FONT></DIV></DIV></BLOCKQUOTE></BODY></HTML>