<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
<html>
<head>
<meta content="text/html;charset=ISO-8859-2" http-equiv="Content-Type">
<title></title>
</head>
<body bgcolor="#ffffff" dir="ltr" text="#000000">
<p>Try using those files as a template, good work.<br>
<br>
Michal Kolinski wrote:<br>
</p>
<blockquote cite="mid001501c4cd8d$7d05ee40$be01000a@hades" type="cite">
<meta http-equiv="Content-Type" content="text/html; ">
<meta content="MSHTML 6.00.2900.2523" name="GENERATOR">
<style></style>
<div><font face="Arial" size="2">
<p class="MsoNormal" style="margin: 0cm 0cm 0pt;"><span lang="EN-US"><font
size="3"><font face="Times New Roman">Dear all.<o:p></o:p></font></font></span></p>
<p class="MsoNormal" style="margin: 0cm 0cm 0pt;"><span lang="EN-US"><font
face="Times New Roman" size="3">I’m new with gromacs.<span style=""> </span>I
plan to simulate kappa opioid receptor model in </font></span></p>
<p class="MsoNormal" style="margin: 0cm 0cm 0pt;"><span lang="EN-US"><font
face="Times New Roman" size="3">a lipid membrane.<span style=""> </span>I
prepared all the necessary input files.<span style=""> </span>Eventually
during</font></span></p>
<p class="MsoNormal" style="margin: 0cm 0cm 0pt;"><span lang="EN-US"><font
face="Times New Roman" size="3">EM I get some strange results, and it
goes only for 15 -20</font></span></p>
<p class="MsoNormal" style="margin: 0cm 0cm 0pt;"><span lang="EN-US"><font
face="Times New Roman" size="3">steps.<span style=""> </span>If
anyone has mdp example file for the protein-membrane system </font></span></p>
<p class="MsoNormal" style="margin: 0cm 0cm 0pt;"><span lang="EN-US"><font
size="3"><font face="Times New Roman">EM and MD please send me one.<span
style=""> </span>Thank you in advance. <span style=""> </span><span
style=""> </span><span style=""> </span><span style=""> </span></font></font></span></p>
<p class="MsoNormal" style="margin: 0cm 0cm 0pt;"><span lang="EN-US"><font
size="3"><font face="Times New Roman">(128DPPC membrane <span style=""> </span>with
GPCR) <o:p></o:p></font></font></span></p>
</font></div>
<pre wrap="">
<hr size="4" width="90%">
_______________________________________________
gmx-users mailing list
<a class="moz-txt-link-abbreviated" href="mailto:gmx-users@gromacs.org">gmx-users@gromacs.org</a>
<a class="moz-txt-link-freetext" href="http://www.gromacs.org/mailman/listinfo/gmx-users">http://www.gromacs.org/mailman/listinfo/gmx-users</a>
Please don't post (un)subscribe requests to the list. Use the
www interface or send it to <a class="moz-txt-link-abbreviated" href="mailto:gmx-users-request@gromacs.org">gmx-users-request@gromacs.org</a>.</pre>
</blockquote>
</body>
</html>