<DIV>hi, </DIV>
<DIV> </DIV>
<DIV>threads is not actually present in current release. You may try to re-compile without --enable-threads. Threads does not affect mpi.</DIV>
<DIV> </DIV>
<DIV>Yang Ye<BR><BR><B><I>shouliang dong <shouliangdong@gmail.com></I></B> wrote:</DIV>
<BLOCKQUOTE class=replbq style="PADDING-LEFT: 5px; MARGIN-LEFT: 5px; BORDER-LEFT: #1010ff 2px solid">I have a 4 cpu system. I compiled gromacs with the flags:<BR>--enabled-threads --enabled-mpi...... When I run mdrun with -nt 4 (it<BR>should be use 4 cpu) flag, it showed me that "Fatal error: GROMACS<BR>compiled without threads support - can only use one thread<BR>[0] MPI Abort by user Aborting program !<BR>[0] Aborting program!<BR>p0_5482: p4_error: : -1<BR>p4_error: latest msg from perror: Success"<BR><BR>I read some messages about how to run mdrun on dual cpu system. It<BR>seamed that I need use the LAM-MPI. It is necessory or not for me? How<BR>should I do for the 4 cpu system?<BR><BR>Thanks a lot!<BR><BR>Shouliang<BR>_______________________________________________<BR>gmx-users mailing list<BR>gmx-users@gromacs.org<BR>http://www.gromacs.org/mailman/listinfo/gmx-users<BR>Please don't post (un)subscribe requests to the list. Use the <BR>www interface or send it to
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