<html>
<blockquote type=cite class=cite cite> When I used g_sas -f
traj.xtc -s topol.tpr -o area.xvg,I got the output<br>
file with<br>
0 102.4 255.7
124 0 etc which I have no idea of.Can anyone
tell</blockquote><br>
Check the header text of the any text data file generated by GROMACS, it
typically tells you there what each column is. From memory, for
g_sas (which calculates solvent accessible surface area) it is time,
hydrophobic, hydrophilic, total and enthalpy, or some variation of
that. Check the header text, it will tell you.<br><br>
<blockquote type=cite class=cite cite>me what options should be used with
g_sas to get the desired temporal<br>
behavior of lipid.It should be of the order 0.6-0.7.</blockquote><br>
What do you mean by temporal behaviour?<br><br>
Catch ya,<br>
<x-sigsep><p></x-sigsep>
<b>Dr. Dallas Warren<br>
</b><i>Lecturer<br>
</i>Department of Pharmaceutical Biology and Pharmacology<br>
Victorian College of Pharmacy, Monash University<br>
381 Royal Parade, Parkville VIC 3010<br>
<font color="#0000FF"><u>dallas.warren@vcp.monash.edu.au<br>
</u></font>+61 3 9903 9083<br>
<font face="Times New Roman, Times">--------------------------------------------------------------------------<br>
<i>When the only tool you own is a hammer, every problem begins to
resemble a nail.</font></i></html>