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Dear Sir,<BR>
I have to run MD simulation for a protein under certain pH and i have added the hydrogens to the pdb file accordingly using BUILDER module in InsightII. <BR>
Now i have the pdb file with required hydrogens added and i want to generate a gro file but i dont want pdb2gmx to add further hydrogens to my pdb file.<BR>
What are my options?<BR>
<BR>
Balamurugan<BR>
Bioinformatics Centre<BR>
Pondicherry University<BR>
India<BR>
<BR>
<BR>
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