<html>
<body>
We use pymol.<br><br>
At 07:06 PM 8/1/2005, you wrote:<br>
<blockquote type=cite class=cite cite><font face="arial" size=2>Hi
All,<br>
<br>
Does anyone have any suggestions for tools to view trajectories.<br>
<br>
I have a few .xtc files that are of 1ns simulations that are about
40Mb.<br>
I have a few .xtc files that are of 5ns simulations that are about
200Mb.<br>
<br>
I’m using VMD right now, but unfortunately it won’t let me see the back
50% of my 5ns simulations. At the stop point a molecule looks to be
out of place and I can’t view any further into the trajectory even though
I know more data is there and my simulation log doesn’t have any
errors.<br>
<br>
Any suggestions?<br>
<br>
Thanks,<br>
<br>
Matt<br>
</font>_______________________________________________<br>
gmx-users mailing list<br>
gmx-users@gromacs.org<br>
<a href="http://www.gromacs.org/mailman/listinfo/gmx-users" eudora="autourl">http://www.gromacs.org/mailman/listinfo/gmx-users</a><br>
Please don't post (un)subscribe requests to the list. Use the <br>
www interface or send it to gmx-users-request@gromacs.org.
</blockquote>
<x-sigsep><p></x-sigsep>
---------------------------------<br>
Eric Jakobsson, Ph.D.<br>
Professor, Department of Molecular and Integrative Physiology, and of
Biochemistry, and of the Center for Biophysics and Computational
Biology<br>
Senior Research Scientist, National Center for Supercomputing
Applications<br>
Professor, Beckman Institute for Advanced Science and Technology<br>
4021 Beckman Institute, mc251<br>
University of Illinois, Urbana, IL 61801<br>
ph. 217-244-2896 fax
217-244-2909<br><br>
<br><br>
</body>
</html>