*** Warning: This system can not link to static lib archive /usr/local/lib/libfftw3.la.<br>
*** I have the capability to make that library automatically link in when<br>
*** you link to this library. But I can only do this if you have a<br>
*** shared version of the library, which you do not appear to have.<br>
<br>
<br>
I hope this is the real error.<br>
<br>
Now please tell me what is wrong ? <br><br><div><span class="gmail_quote">On 1/19/06, <b class="gmail_sendername">David van der Spoel</b> <<a href="mailto:spoel@xray.bmc.uu.se">spoel@xray.bmc.uu.se</a>> wrote:</span>
<blockquote class="gmail_quote" style="border-left: 1px solid rgb(204, 204, 204); margin: 0pt 0pt 0pt 0.8ex; padding-left: 1ex;">Dhananjay wrote:<br>> Well, I have Gromacs-3.3 with single precision.<br>><br>> lam-7.0.6
is alrady installed and fftw-3.0.1 with double precision is<br>> also installed.<br>> befire excuting following steps I have gone through following steps:<br>><br>> export CPPFLAGS=-I/usr/local/includ<br>> export LDFLAGS=-L/usr/local/lib
<br>><br>> then for Gromacs-3.3 with double precission I took following steps:<br>><br>> 1. make distclean<br>> 2. ./configure --disable-float --enable-shared<br>> 3. make<br>><br>> make has generated following error:
<br>><br>> collect2: ld returned 1 exit status<br>> make[3]: *** [grompp] Error 1<br>> make[3]: Leaving directory<br>> `/usr/data/dhananjay/Dhananjay_installation/Gromacs/gromacs-3.3/src/kernel'<br>> make[2]: *** [all-recursive] Error 1
<br>> make[2]: Leaving directory<br>> `/usr/data/dhananjay/Dhananjay_installation/Gromacs/gromacs-3.3/src'<br>> make[1]: *** [all] Error 2<br>> make[1]: Leaving directory<br>> `/usr/data/dhananjay/Dhananjay_installation/Gromacs/gromacs-
3.3/src'<br>> make: *** [all-recursive] Error 1<br>><br>><br>> What is wrong here ?<br>You still don't print the real error.<br><br>><br>><br>> On 1/19/06, *David van der Spoel* <<a href="mailto:spoel@xray.bmc.uu.se">
spoel@xray.bmc.uu.se</a><br>> <mailto:<a href="mailto:spoel@xray.bmc.uu.se">spoel@xray.bmc.uu.se</a>>> wrote:<br>><br>> Dhananjay wrote:<br>> > Hello all,<br>> ><br>> > I got error in installation of gromacs in double precision. The
<br>> error is<br>> > as follows:<br>> ><br>> > collect2: ld returned 1 exit status<br>> > make[3]: *** [grompp] Error 1<br>> > make[3]: Leaving directory<br>> >
<br>> `/usr/data/dhananjay/Dhananjay_installation/Gromacs/gromacs-3.3/src/kernel'<br>> > make[2]: *** [all-recursive] Error 1<br>> > make[2]: Leaving directory<br>> > `/usr/data/dhananjay/Dhananjay_installation/Gromacs/gromacs-
3.3/src'<br>> > make[1]: *** [all] Error 2<br>> > make[1]: Leaving directory<br>> > `/usr/data/dhananjay/Dhananjay_installation/Gromacs/gromacs-3.3/src'<br>> > make: *** [all-recursive] Error 1
<br>> ><br>> > I have followed all the steps given on the web and still grtting<br>> this error.<br>> ><br>> > Please tell me what is wrong here ?<br>> you have not send the interesting bit of information, right before this,
<br>> i.e. the real error.<br>> what platform is this?<br>><br>> ><br>> > -- Dhananjay<br>> ><br>> ><br>> ><br>> ------------------------------------------------------------------------
<br>> ><br>> > _______________________________________________<br>> > gmx-users mailing list<br>> > <a href="mailto:gmx-users@gromacs.org">gmx-users@gromacs.org</a> <mailto:<a href="mailto:gmx-users@gromacs.org">
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</a>>.<br>><br>><br>> --<br>> David.<br>> ________________________________________________________________________<br>> David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
<br>> Dept. of Cell and Molecular Biology, Uppsala University.<br>>
Husargatan 3, Box
596, 75124
Uppsala, Sweden<br>> phone: 46 18
471
4205 fax: 46
18 511 755<br>> <a href="mailto:spoel@xray.bmc.uu.se">spoel@xray.bmc.uu.se</a><br>> <mailto:<a href="mailto:spoel@xray.bmc.uu.se">spoel@xray.bmc.uu.se</a>> <a href="mailto:spoel@gromacs.org">spoel@gromacs.org
</a><br>> <mailto:<a href="mailto:spoel@gromacs.org">spoel@gromacs.org</a>> <a href="http://folding.bmc.uu.se">http://folding.bmc.uu.se</a><br>> ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
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> www interface or send it to <a href="mailto:gmx-users-request@gromacs.org">gmx-users-request@gromacs.org</a>.<br><br><br>--<br>David.<br>________________________________________________________________________<br>David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
<br>Dept. of Cell and Molecular Biology, Uppsala University.<br>Husargatan 3, Box 596, 75124 Uppsala, Sweden<br>phone: 46 18 471 4205 fax: 46 18 511 755<br><a href="mailto:spoel@xray.bmc.uu.se">spoel@xray.bmc.uu.se
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