<html><head><style type="text/css"><!-- DIV {margin:0px} --></style></head><body><div style="font-family:times new roman, new york, times, serif;font-size:12pt"><div style="font-family: times new roman,new york,times,serif; font-size: 12pt;">with an index file<br><br><div style="font-family: times new roman,new york,times,serif; font-size: 12pt;">----- Original Message ----<br>From: Dhananjay <dhananjay.c.joshi@gmail.com><br>To: Discussion list for GROMACS users <gmx-users@gromacs.org><br>Sent: Monday, July 17, 2006 11:36:29 PM<br>Subject: [gmx-users] RMSD for domain<br><br>Hello all,<br><br>My protein consist of two domains. <br><br>I got RMSD plot for complete system.<br><br>According to the manual one can calculate RMSD for different time period by initiating initial and final time.<br><br>
Will it be possible to calculate RMSD for two seperate domains(by restricting residues) of the same system over same time period?<br clear="all"><br>Thanking you in advance.<br><br>-- <br>Dhananjay<div>_______________________________________________<br>gmx-users mailing list gmx-users@gromacs.org<br><a target="_blank" href="http://www.gromacs.org/mailman/listinfo/gmx-users">http://www.gromacs.org/mailman/listinfo/gmx-users</a><br>Please don't post (un)subscribe requests to the list. Use the <br>www interface or send it to gmx-users-request@gromacs.org.<br>Can't post? Read <a target="_blank" href="http://www.gromacs.org/mailing_lists/users.php">http://www.gromacs.org/mailing_lists/users.php</a></div></div><br></div></div></body></html>