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<DIV><FONT size=2><FONT size=3>hi cw,<BR><BR>using trjconv -pbc nojump should
remove the jumps. then you can analyse <BR>interactions between different
chains, while it doesn't matter for the <BR>analysis where they
diffuse.<BR><BR>daniela</FONT><BR></FONT></DIV>
<DIV><FONT size=2>hello, daniela</FONT></DIV>
<DIV><FONT size=2></FONT> </DIV>
<DIV><FONT size=2>thanks for your reply, it really doesn't matter when i
calculate the distance between two peptides ?</FONT></DIV>
<DIV><FONT size=2></FONT> </DIV>
<DIV><FONT size=2>best regards,</FONT></DIV>
<DIV><FONT size=2></FONT> </DIV>
<DIV><FONT size=2>Liang</DIV></FONT></BODY></HTML>