Hi, <br> I built up a box of polymer with box size 20x20x20 and then solvate the box with water using Genbox. Thus the total atom number exceeds 99999 and I found that the atom number starts from zero when it exceeds 99999. Does it matter for the ongoing command "grompp" and "mdrun"? Thanks.
<br> Yours Sincerely,<br> WU Yanbin<br clear="all">
<br>-- <br>-----------------------------------------------------------------------------------------------------------------------<br>WU Yanbin<br>Department of Mechanical Science and Engineering Email: <a href="mailto:ywu27@uiuc.edu">
ywu27@uiuc.edu</a><br>3323 Beckman Institute Phone: (217)819-9064<br>University of Illinois at Urbana-Champaign<br>405 N. Mathews Avenue<br>Urbana, IL 61801<br>-----------------------------------------------------------------------------------------------------------------------