<pre><i><br></i><i> Hi Mark,</i><i><br></i></pre> <div style="text-align: right;"> <div style="text-align: left;"><i> form gmx-usesr list one mail draws my attention, where you</i><i> inform that you are making available under GPL two perl </i><i>scripts, one of which converts</i><i><br> CHARMM27.prm file into </i><i>the necessary .itp files for pdb2gmx to use to</i><i> produce </i><br> <i>.top files, and another that massages that .top file into</i><i> something that will produce a .tpr file that will get</i><i> CHARMM energy &</i><i> force evaluations. </i><br> <i><br> I have coordinates for bilayer using CHARMM27 . I want to </i><br> <i>convert this into gromacs structure file. I had tried </i><i>"PRODRG" , but it did not work as my .pdb file contain >2000 </i><i>atoms.</i><br> <i><br> Plz suggest how can I get these perl scripts to make .tpr files.<br> <br>
Thanks.<br> </i></div> <br> </div> <pre><i><br></i></pre><p>
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