cpp = /lib/cpp integrator = md tinit = 2800.000 dt = 0.001 nsteps = 100000 nstcomm = 1 nstxout = 0 nstvout = 0 nstfout = 0 nstxtcout = 0; 5 ;10 xtc-precision = 1000 ;NAO MEXER! nstlog = 10 nstenergy = 10 nstlist = 5 energygrps = System ns_type = grid ; Constraints use is: ;constraints = none constraints = all-bonds ;constraint_algorithm = lincs constraint_algorithm = shake ;Treatment of Vdw and Elctrostatics: vdwtype = cut-off DispCorr = EnerPres rlist = 1.30 rvdw = 1.30 coulombtype = PME rcoulomb = 1.30 fourierspacing = 0.1 pme_order = 4 ewald_rtol = 1e-05 optimize_fft = yes ; Temperature coupling is: Tcoupl = nose-hoover tau_t = 0.03 tc-grps = System ref_t = 298.15 ; Pressure coupling is: Pcoupl = Parrinello-Rahman pcoupltype = isotropic tau_p = 2.500 compressibility = 4.5e-5 ref_p = 1.01325 ;bar == 1. atm ; Generate velocites at 298K is: gen_vel = no gen_temp = 98.15 ;gen_seed = 173529 gen_seed = 12041979