Dear colleagues<br>I have made simulation of infinite nanotubes in solvent environment. <br>However I can not use the usual tools of the GROMACS to analyze my
simulation <br>(as g_rdf, trajorder, etc) due to axial symmetry
(cylindrical). <br><br>Problem that I need to solve are the calculation of
rdf <br>(taking as reference the axis of the nanotube, not the COM)<br>and also the analysis of the number of molecules into the first solvation shell.<br clear="all"><br>Have anybody some suggestion of standalone program or GROMACS tools for help me?
<br><br>Thanks<br>eef<br>-- <br>_______________________________________<br>Eudes Eterno Fileti<br>Centro de Ciência Naturais e Humanas<br>Universidade Federal do ABC<br>Rua Catequese, 242 - 3º Andar<br>09090-400 Santo André - SP Brasil
<br>Tel: +55 11 4437-1600 ramal 408<br>skype: eefileti<br><a href="http://cromo.ufabc.edu.br/~fileti/">http://cromo.ufabc.edu.br/~fileti/</a>