<DIV>Dear Wassenaar</DIV> <DIV><BR> </DIV> <DIV>I appreciate your kindly help.</DIV> <DIV> </DIV> <DIV>Respectffuly<BR><B><I>Tsjerk Wassenaar <tsjerkw@gmail.com></I></B> wrote:</DIV> <BLOCKQUOTE class=replbq style="PADDING-LEFT: 5px; MARGIN-LEFT: 5px; BORDER-LEFT: #1010ff 2px solid">Hi Mitra,<BR><BR>You can add it in the file FF.dat in the $GMXDIR/share/gromacs/top/ directory.<BR><BR>Cheers,<BR><BR>Tsjerk<BR><BR> <DIV class=gmail_quote>On Jan 8, 2008 3:35 PM, Mitra Kheirabadi <<A href="mailto:mitrakheirabadi@yahoo.com"> mitrakheirabadi@yahoo.com</A>> wrote:<BR> <BLOCKQUOTE class=gmail_quote style="PADDING-LEFT: 1ex; MARGIN: 0pt 0pt 0pt 0.8ex; BORDER-LEFT: rgb(204,204,204) 1px solid"> <DIV>Dear Dr. Smith</DIV> <DIV> </DIV> <DIV>I want to run a virus phosphorylated protein by gromacs. Furtunatly, you construct related force field by ffG43A1p name. I copied this force field to top. file gromacs but when I constructed
pdbgmx, there is no any ffG43a1p to select. Could you help me? </DIV> <DIV>I be so grateful to receive any information about it.</DIV> <DIV> </DIV> <DIV>Respectfully</DIV> <DIV class=WgoR0d> <DIV></DIV> <HR SIZE=1> Never miss a thing. <A href="http://us.rd.yahoo.com/evt=51438/*http://www.yahoo.com/r/hs" target=_blank>Make Yahoo your homepage.</A> </DIV><BR>_______________________________________________<BR>gmx-users mailing list <A href="mailto:gmx-users@gromacs.org">gmx-users@gromacs.org</A><BR><A href="http://www.gromacs.org/mailman/listinfo/gmx-users" target=_blank>http://www.gromacs.org/mailman/listinfo/gmx-users</A><BR>Please search the archive at <A href="http://www.gromacs.org/search" target=_blank>http://www.gromacs.org/search</A> before posting!<BR>Please don't post (un)subscribe requests to the list. Use the <BR>www interface or send it to <A href="mailto:gmx-users-request@gromacs.org">gmx-users-request@gromacs.org</A>.<BR>Can't post?
Read <A href="http://www.gromacs.org/mailing_lists/users.php" target=_blank>http://www.gromacs.org/mailing_lists/users.php </A><BR></BLOCKQUOTE></DIV><BR><BR clear=all><BR>-- <BR>Tsjerk A. Wassenaar, Ph.D.<BR>Junior UD (post-doc)<BR>Biomolecular NMR, Bijvoet Center<BR>Utrecht University<BR>Padualaan 8 <BR>3584 CH Utrecht<BR>The Netherlands<BR>P: +31-30-2539931 <BR>F: +31-30-2537623 _______________________________________________<BR>gmx-users mailing list gmx-users@gromacs.org<BR>http://www.gromacs.org/mailman/listinfo/gmx-users<BR>Please search the archive at http://www.gromacs.org/search before posting!<BR>Please don't post (un)subscribe requests to the list. Use the <BR>www interface or send it to gmx-users-request@gromacs.org.<BR>Can't post? Read http://www.gromacs.org/mailing_lists/users.php</BLOCKQUOTE><BR><p> 
<hr size=1>Never miss a thing. <a href="http://us.rd.yahoo.com/evt=51438/*http://www.yahoo.com/r/hs"> Make Yahoo your homepage.</a>