Hi Mitra,<br><br>You can add it in the file FF.dat in the $GMXDIR/share/gromacs/top/ directory.<br><br>Cheers,<br><br>Tsjerk<br><br><div class="gmail_quote">On Jan 8, 2008 3:35 PM, Mitra Kheirabadi <<a href="mailto:mitrakheirabadi@yahoo.com">
mitrakheirabadi@yahoo.com</a>> wrote:<br><blockquote class="gmail_quote" style="border-left: 1px solid rgb(204, 204, 204); margin: 0pt 0pt 0pt 0.8ex; padding-left: 1ex;"><div>Dear Dr. Smith</div> <div> </div> <div>I want to run a virus phosphorylated protein by gromacs. Furtunatly, you construct related force field by ffG43A1p name. I copied this force field to top. file gromacs but when I constructed pdbgmx, there is no any ffG43a1p to select. Could you help me?
</div> <div>I be so grateful to receive any information about it.</div> <div> </div> <div>Respectfully</div><div class="WgoR0d"><p>
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</a><br></blockquote></div><br><br clear="all"><br>-- <br>Tsjerk A. Wassenaar, Ph.D.<br>Junior UD (post-doc)<br>Biomolecular NMR, Bijvoet Center<br>Utrecht University<br>Padualaan 8 <br>3584 CH Utrecht<br>The Netherlands<br>
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