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thanks for your reply.. but that command gives B-Factor by atom. Is it possible to get by residue... <BR><BR>> From: bjorn.windshugel@uku.fi<BR>> To: gmx-users@gromacs.org<BR>> Subject: Re: [gmx-users] calculating B-factor<BR>> Date: Mon, 18 Feb 2008 12:46:43 +0200<BR>> <BR>> Hi,<BR>> <BR>> check out g_rmsf (options -oq, -q, -ox), rmsf can be converted into B-factors.<BR>> <BR>> <BR>> Best regards,<BR>> <BR>> Björn<BR>> <BR>> <BR>> <BR>> <BR>> > Dear users<BR>> > Is it posible to calculate B-factor for a protein using gromacs?<BR>> > Pragya<BR>> ><BR>> > ________________________________<BR>> > Detailed profiles 4 marriage! Only at Shaadi.com Try<BR>> > it!<http://ss1.richmedia.in/recurl.asp?pid=107><BR>> <BR>> -- <BR>> Dr. Björn Windshügel<BR>> <BR>> Department of Pharmaceutical Chemistry<BR>> University of Kuopio<BR>> P.O. Box 1627<BR>> 70211 Kuopio, FINLAND<BR>> <BR>> Email: bjorn.windshugel@uku.fi<BR>> Phone: (+358) 17 162463<BR>> Fax: (+358) 17 162456<BR>> Web: www.uku.fi/farmasia/fake/modelling/index.shtml<BR>> _______________________________________________<BR>> gmx-users mailing list gmx-users@gromacs.org<BR>> http://www.gromacs.org/mailman/listinfo/gmx-users<BR>> Please search the archive at http://www.gromacs.org/search before posting!<BR>> Please don't post (un)subscribe requests to the list. Use the <BR>> www interface or send it to gmx-users-request@gromacs.org.<BR>> Can't post? Read http://www.gromacs.org/mailing_lists/users.php<BR><br /><hr />Live the life in style with MSN Lifestyle. Check out! <a href='http://content.msn.co.in/Lifestyle/Default' target='_new'>Try it now!</a></body>
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