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Dear users<BR>
<BR>
I have run a protein XX in water. According to literature, it is supposed to undergo tertiary structure changes without much secondary structure changes.<BR>
<BR>
Can anyone help me with what can be a suitable analysis method for it.<BR>
The other changes reported include 1. change in hydrophobicity - which I have done <BR>
2. some change from helix to coil which I have done through do_dssp<BR>
<BR>
Any other suggestion is appreciated<BR>
<BR>
Thanking You<BR>
<BR>
Pragya Chohan<BR>
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