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<body class='hmmessage'><div style="text-align: left;">Hi,<br><br>The oscillations are normal.<br><br>Berk.<br></div><br><hr id="EC_stopSpelling">Date: Thu, 17 Jul 2008 11:59:12 -0400<br>To: gmx-users@gromacs.org<br>From: vuh105@psu.edu<br>Subject: [gmx-users] Constraint Pulling - Oscillating Forces<br><br><div>Hello,<br><br> I am running constraint pulling on a
peptide chain. After the run, the pull.pdo file outputs the time, along
with the force (in kJ/(mol nm)). The problem is that the forces are
oscillating between almost 1000 pN. I tried to reduce the constraint
tolerance, but it does not help that much. Any suggestions on reducing hte
oscillations of force?
Thanks.<br><br>______________________________<br><br>Venkatesh
Hariharan<br>Pennsylvania State University<br>Schreyer Honors
College<br>Undergraduate - Bioengineering<br><br>"You must be the change you
wish to see in the world."<br>--Mohandas Karamchand Gandhi<br><br><br></div>
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