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<TITLE>[gmx-users] Segmentation fault with gromacs 3.3.3 </TITLE>
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<FONT FACE="Calibri, Verdana, Helvetica, Arial"><SPAN STYLE='font-size:11pt'>Dear gmx-users,<BR>
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In Red Hat Enterprise Linux ES release 4 (Nahant Update 4)<BR>
Same problem as in debian.<BR>
<BR>
When I ryn simple test:<BR>
*** glibc detected *** mdrun: realloc(): invalid next size: 0x082a20d0 ***<BR>
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And when I run double test, here is the result;<BR>
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Anyone could help?<BR>
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<a href="selmakies@lc10:gmxtest.3.3.3">selmakies@lc10:gmxtest.3.3.3</a>> ./gmxtest.pl -verbose -double all<BR>
Testing angles1 . . . PASSED but check mdp file differences<BR>
Testing angles125 . . . PASSED but check mdp file differences<BR>
Testing bham . . . FAILED. Check files in bham<BR>
Testing bonds1 . . . PASSED but check mdp file differences<BR>
Testing bonds125 . . . PASSED but check mdp file differences<BR>
Testing dih1 . . . PASSED but check mdp file differences<BR>
Testing dih125 . . . PASSED but check mdp file differences<BR>
Testing g96angles1 . . . PASSED but check mdp file differences<BR>
Testing g96angles125 . . . PASSED but check mdp file differences<BR>
Testing g96bonds1 . . . PASSED but check mdp file differences<BR>
Testing g96bonds125 . . . PASSED but check mdp file differences<BR>
Testing imp1 . . . PASSED but check mdp file differences<BR>
Testing imp36 . . . PASSED but check mdp file differences<BR>
Testing morse . . . PASSED but check mdp file differences<BR>
Testing rb1 . . . *** glibc detected *** realloc(): invalid next size: 0x08292808 ***<BR>
sh: line 1: 20538 Aborted mdrun_d >mdrun.out 2>&1<BR>
FAILED. Check files in rb1<BR>
Testing rb125 . . . PASSED but check mdp file differences<BR>
2 out of 16 simple tests FAILED<BR>
Testing acetonitrilRF . . . PASSED but check mdp file differences<BR>
Testing aminoacids . . . FAILED. Check files in aminoacids<BR>
Testing argon . . . PASSED but check mdp file differences<BR>
Testing butane . . . PASSED but check mdp file differences<BR>
Testing dec+water . . . PASSED but check mdp file differences<BR>
Testing ethyleenglycol . . . PASSED but check mdp file differences<BR>
Testing fe_test . . . PASSED but check mdp file differences<BR>
Testing field . . . PASSED but check mdp file differences<BR>
Testing nacl . . . PASSED but check mdp file differences<BR>
Testing sw . . . PASSED but check mdp file differences<BR>
Testing tip4p . . . PASSED<BR>
Testing tip4pflex . . . PASSED but check mdp file differences<BR>
Testing urea . . . Illegal division by zero at ./gmxtest.pl line 63, <FIN> line 1.<BR>
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