<P>
<BR>
Hi all, <BR>
I have issued the command of g_hbond like this<BR>
g_hbond -f .xtc -s .tpr -n .ndx -num .xvg -hbm.map -a 30<BR>
while finishing of this command, it told 1 H-bond found and run successfully. When I plotted .xvg file by using gnuplot its showed zigzag manner graph(abnormal) and I never got this type of plot.<BR>
for information I am sending .xvg file<BR>
<BR>
@ title "Hydrogen Bonds"<BR>
@ xaxis label "Time"<BR>
@ yaxis label "Number"<BR>
@TYPE xy<BR>
@ view 0.15, 0.15, 0.75, 0.85<BR>
@ legend on<BR>
@ legend box on<BR>
@ legend loctype view<BR>
@ legend 0.78, 0.8<BR>
@ legend length 2<BR>
@ s0 legend "Hydrogen bonds"<BR>
@ s1 legend "Pairs within 0.35 nm"<BR>
0 0 7<BR>
0.2 0 7 <BR>
0.6 0 8<BR>
0.8 0 7<BR>
1 0 8<BR>
1.2 0 8<BR>
1.4 0 8<BR>
1.6 0 7<BR>
1.8 1 8<BR>
2 0 8<BR>
2.2 0 8<BR>
2.4 0 7<BR>
2.6 1 6<BR>
2.8 0 9<BR>
3 0 8<BR>
3.2 0 8<BR>
3.4 0 6<BR>
3.6 0 7<BR>
3.8 0 7<BR>
4 0 8<BR>
4.2 0 6<BR>
<BR>
This 1 digit appearing often in 2 column till final time.<BR>
<BR>
Could suggest me how to get proper Hydrogen bond plot.<BR>
Thanks in advance.<BR>
</P>
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