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<body class='hmmessage'><div style="text-align: left;">Hi,<br><br>The same as in normal simulations.<br>I always use PME and PBC in my implicit solvent simulations.<br><br>Berk<br></div><br><br><hr id="stopSpelling">> From: X.Periole@rug.nl<br>> Subject: Re: [gmx-users] Implicit solvent & PBC<br>> To: gmx-users@gromacs.org<br>> Date: Fri, 19 Sep 2008 14:52:39 +0200<br>> <br>> On Fri, 19 Sep 2008 17:28:20 +0530 (IST)<br>> Anirban Ghosh <anirbanz83@yahoo.co.in> wrote:<br>> > Hi All,<br>> > <br>> > I am simulating a Coarse Grained model using implicit solvent condition. Can <br>> >Periodic Boundary Condition and Particle-Mesh-Ewald be used with implicit <br>> >solvent simulation? <br>> What would be the use of PME and PBC in implicit solvent?<br>> > Thanks,<br>> > <br>> > <br>> > <br>> > <br>> > Anirban Ghosh<br>> > M.Tech Bioinformatics<br>> > University of Hyderabad<br>> > <br>> > <br>> > <br>> > Unlimited freedom, unlimited storage. Get it now, on <br>> >http://help.yahoo.com/l/in/yahoo/mail/yahoomail/tools/tools-08.html/<br>> <br>> -----------------------------------------------------<br>> XAvier Periole - PhD<br>> <br>> Molecular Dynamics Group / NMR and Computation<br>> University of Groningen<br>> The Netherlands<br>> -----------------------------------------------------<br>> _______________________________________________<br>> gmx-users mailing list gmx-users@gromacs.org<br>> http://www.gromacs.org/mailman/listinfo/gmx-users<br>> Please search the archive at http://www.gromacs.org/search before posting!<br>> Please don't post (un)subscribe requests to the list. Use the <br>> www interface or send it to gmx-users-request@gromacs.org.<br>> Can't post? Read http://www.gromacs.org/mailing_lists/users.php<br><br /><hr />Express yourself instantly with MSN Messenger! <a href='http://clk.atdmt.com/AVE/go/onm00200471ave/direct/01/' target='_new'>MSN Messenger</a></body>
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