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<BR>
<BR>
> > I am having general doubts regaring GROMACS those are unclear me writing you<BR>
> > 1. If a system contain equal number of atoms run these systems in GROMACS and in AMBER why former one simulates faster<BR>
> > than second one?<BR>
><BR>
>Because GROMACS is a great software.<BR>
Thanks for the reply, what may be the reason GROMACS became great?<BR>
<BR>
> > 2.If do minisation while running shows that<BR>
> > Back Off! I just backed up step53.pdb what may be the reason?<BR>
><BR>
>The system is exploding.<BR>
sometimes though system explodes it will generate energy minimisation output.gro file we cant use this file for further run?<BR>
This may be trivial doubts.....<BR>
Any suggestions would be appreciated<BR>
Thanks alot in advance.<BR>
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