<div dir="ltr">Dear Justin and Xavier,<br><br>Thanks for the suggestions.<br><br>Ram. <br><br><div class="gmail_quote">On Tue, Oct 7, 2008 at 11:45 AM, Xavier Periole <span dir="ltr"><<a href="mailto:X.Periole@rug.nl">X.Periole@rug.nl</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="border-left: 1px solid rgb(204, 204, 204); margin: 0pt 0pt 0pt 0.8ex; padding-left: 1ex;"><div><div></div><div class="Wj3C7c">On Tue, 7 Oct 2008 11:39:45 -0400<br>
"rams rams" <<a href="mailto:rams.crux@gmail.com" target="_blank">rams.crux@gmail.com</a>> wrote:<br>
<blockquote class="gmail_quote" style="border-left: 1px solid rgb(204, 204, 204); margin: 0pt 0pt 0pt 0.8ex; padding-left: 1ex;">
Dear Users,<br>
<br>
I tried to create a trajectory file from a set of pdb files (infact several<br>
of them) starting from time frame 0 to lets say 100 with an interval of 1ps<br>
each. If I use the following command,<br>
<br>
trjconv -f 0.xtc 1.xtc ......100.xtc -o .xtc<br>
<br>
its resuling only one frame (I think its not stiching them).<br>
<br>
If I use "-settime" along with the above command, it is stiching all the<br>
frames, but its asking for the start time for each frame. Its really<br>
difficult to mention the start times for several hundred frames. Is there<br>
any way we can handle this.<br>
</blockquote></div></div>
generate a file let say toto containing:<br>
1<br>
2<br>
3<br>
4<br>
5<br>
6<br>
...<br>
100<br>
<br>
and then run trjcat -f ... -settime < toto<br>
<blockquote class="gmail_quote" style="border-left: 1px solid rgb(204, 204, 204); margin: 0pt 0pt 0pt 0.8ex; padding-left: 1ex;">
<br>
Thanks.<br>
Ram.<br>
</blockquote>
<br>
-----------------------------------------------------<br>
XAvier Periole - PhD<br>
<br>
- Molecular Dynamics Group -<br>
NMR and Computation<br>
University of Groningen<br>
The Netherlands<div><div></div><div class="Wj3C7c"><br>
-----------------------------------------------------<br>
_______________________________________________<br>
gmx-users mailing list <a href="mailto:gmx-users@gromacs.org" target="_blank">gmx-users@gromacs.org</a><br>
<a href="http://www.gromacs.org/mailman/listinfo/gmx-users" target="_blank">http://www.gromacs.org/mailman/listinfo/gmx-users</a><br>
Please search the archive at <a href="http://www.gromacs.org/search" target="_blank">http://www.gromacs.org/search</a> before posting!<br>
Please don't post (un)subscribe requests to the list. Use the www interface or send it to <a href="mailto:gmx-users-request@gromacs.org" target="_blank">gmx-users-request@gromacs.org</a>.<br>
Can't post? Read <a href="http://www.gromacs.org/mailing_lists/users.php" target="_blank">http://www.gromacs.org/mailing_lists/users.php</a><br>
</div></div></blockquote></div><br></div>