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<DIV><FONT face=Calibri>Hi.I have recently installed Gromacs-3.3.3. & I
want to study protein folding on a small protein.Where should I get more
information about protein folding in Gromacs, what has been done up until now
& how was it done(except the manual)? I tried but I didn’t find a lot.What
kind of force field it is used? I found that implicit models are not suggested
for Gromacs. What about coarse-grained models? Can I use such models in
Gromacs?Or an all-atom model should be used?I found smth about the MARTINI model
in studies of more complex protein-lipids models. But what about trying to fold
a single peptide on a reasonable time-scale? I am trying to find a way to get
started..Any advice would be apreciated.Thanks!</FONT></DIV></BODY></HTML>