<table cellspacing="0" cellpadding="0" border="0" ><tr><td valign="top" style="font: inherit;"><DIV>Dear sir :</DIV>
<DIV>how to motify the $5 in details?</DIV>
<DIV>Thank you! </DIV>
<DIV><BR><BR><BR><A class=plink href="http://cn.webmessenger.yahoo.com/index.php?t=1&amp;to=eWlkPXpoYW94aWl0YzIwMDI-&amp;sig=703fa929658518b2720b087c59cd85f2dabf8844" target=_blank rel=nofollow><IMG class=pimg alt=4 src="http://opi.yahoo.com/online?u=zhaoxiitc2002&amp;t=4&amp;l=cn" border=0></A><BR><BR>--- <B>09年5月8日,周五, Justin A. Lemkul <I>&lt;jalemkul@vt.edu&gt;</I></B> 写道:<BR></DIV>
<BLOCKQUOTE style="PADDING-LEFT: 5px; MARGIN-LEFT: 5px; BORDER-LEFT: rgb(16,16,255) 2px solid"><BR>发件人: Justin A. Lemkul &lt;jalemkul@vt.edu&gt;<BR>主题: Re: [gmx-users] how to use atom2cg.awk<BR>收件人: "Discussion list for GROMACS users" &lt;gmx-users@gromacs.org&gt;<BR>日期: 2009年5月8日,周五,下午6:46<BR><BR>
<DIV class=plainMail><BR><BR>xi zhao wrote:<BR>&gt; <BR>&gt; <BR>&gt; Dear Sirs:<BR>&gt;&nbsp;&nbsp;&nbsp;I wang to know simulate coarse-graied system using gromacs, but I don not know how to use atom2cg.awk to convert CG model!<BR>&gt; Thank you very much!<BR>&gt; <BR><BR>./atom2cg_v2.1_tryout.awk my.pdb &gt; out.pdb<BR><BR>Note that the script available online needs to be modified to include a $5 between the $4 and $6 on each line, otherwise you will get an incorrectly-formatted .pdb file.<BR><BR>-Justin<BR><BR>&gt; 4 &lt;<A href="http://cn.webmessenger.yahoo.com/index.php?t=1&amp;to=eWlkPXpoYW94aWl0YzIwMDI-&amp;sig=703fa929658518b2720b087c59cd85f2dabf8844" target=_blank>http://cn.webmessenger.yahoo.com/index.php?t=1&amp;to=eWlkPXpoYW94aWl0YzIwMDI-&amp;sig=703fa929658518b2720b087c59cd85f2dabf8844</A>&gt;<BR>&gt; <BR>&gt; <BR>&gt; ------------------------------------------------------------------------<BR>&gt;
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 <A href="http://cn.mc151.mail.yahoo.com/mc/compose?to=gmx-users-request@gromacs.org" ymailto="mailto:gmx-users-request@gromacs.org">gmx-users-request@gromacs.org</A>.<BR>&gt; Can't post? Read <A href="http://www.gromacs.org/mailing_lists/users.php" target=_blank>http://www.gromacs.org/mailing_lists/users.php</A><BR><BR>-- ========================================<BR><BR>Justin A. Lemkul<BR>Ph.D. Candidate<BR>ICTAS Doctoral Scholar<BR>Department of Biochemistry<BR>Virginia Tech<BR>Blacksburg, VA<BR>jalemkul[at]vt.edu | (540) 231-9080<BR><A href="http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin" target=_blank>http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin</A><BR><BR>========================================<BR>_______________________________________________<BR>gmx-users mailing list&nbsp; &nbsp; <A href="http://cn.mc151.mail.yahoo.com/mc/compose?to=gmx-users@gromacs.org"
 ymailto="mailto:gmx-users@gromacs.org">gmx-users@gromacs.org</A><BR><A href="http://www.gromacs.org/mailman/listinfo/gmx-users" target=_blank>http://www.gromacs.org/mailman/listinfo/gmx-users</A><BR>Please search the archive at <A href="http://www.gromacs.org/search" target=_blank>http://www.gromacs.org/search</A> before posting!<BR>Please don't post (un)subscribe requests to the list. Use the<BR>www interface or send it to <A href="http://cn.mc151.mail.yahoo.com/mc/compose?to=gmx-users-request@gromacs.org" ymailto="mailto:gmx-users-request@gromacs.org">gmx-users-request@gromacs.org</A>.<BR>Can't post? Read <A href="http://www.gromacs.org/mailing_lists/users.php" target=_blank>http://www.gromacs.org/mailing_lists/users.php</A><BR></DIV></BLOCKQUOTE></td></tr></table><br>


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