Dear all,<br>I want to extend the membrane into 512 POPC with the starting structure of 128 POPC. I 've used :-<br>editconf -f xxx.pdb -scale 2 2 1 -o zzz.pdb.<br>I noticed that the pdb file that generated by editconf have only 1 set of 128 popc. Using vmd, the extended structure is in pieces, the no bond between each atom. When i checked the pdb file, i didn't find any atomic coordination for the extended set of POPC. Did i missed out anything here? or what I've done is wrong here?<br>
<br>When i used genconf , the extended structure looks fine. But, i found some discussion regarding genconf whereby the structure will not be in one pieces if this command is used. Please advice.<br><br>Thank in advance.<br>
<br><br>Regards,<br>bing <br>