Hi Anirban,<br>when you choose in make_ndx, you choose group 3 and (&) r 2 3 4 5 6...and so on...<br>in make_ndx there is a legend that explain this passage well...<br>Bye! <br><br><div class="gmail_quote">2009/7/9 Anirban Ghosh <span dir="ltr"><<a href="mailto:anirbanz83@yahoo.co.in">anirbanz83@yahoo.co.in</a>></span><br>
<blockquote class="gmail_quote" style="border-left: 1px solid rgb(204, 204, 204); margin: 0pt 0pt 0pt 0.8ex; padding-left: 1ex;"><table border="0" cellpadding="0" cellspacing="0"><tbody><tr><td style="font-family: inherit; font-style: inherit; font-variant: inherit; font-weight: inherit; font-size: inherit; line-height: inherit; font-size-adjust: inherit; font-stretch: inherit;" valign="top">
Hi ALL,<br><br>I want to create an index file using make_ndx which will contain only C-alpha atoms of some residues (like from residue no 2-10, res 25-30, res 36-40). How should I give this option in make_ndx. Any suggestion is welcome.<br>
<br>Regards,<br><font color="#888888"><br><br><div><font color="#0000bf" size="4"></font> </div><div style="color: rgb(0, 0, 191);"><b>Anirban Ghosh</b></div><div style="color: rgb(0, 0, 191);"><b>Grade Based Engineer<br>
Bioinformatics Team<br>Centre for Development of Advanced Computing (C-DAC)<br>Pune, India<br></b></div></font></td></tr></tbody></table><div class="hm"><br>
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