I think that you can do it in vmd<br><br><div class="gmail_quote">On Tue, Jul 7, 2009 at 11:18 PM, Ragnarok sdf <span dir="ltr"><<a href="mailto:fabracht1@gmail.com">fabracht1@gmail.com</a>></span> wrote:<br><blockquote class="gmail_quote" style="border-left: 1px solid rgb(204, 204, 204); margin: 0pt 0pt 0pt 0.8ex; padding-left: 1ex;">
I came across a tool for making "porcupine" plots out of my PCA<br>
analysis, but first I need to perform the analysis with a program that<br>
accepts .cdr (amber traj) file format (the name of the program is<br>
PCAZIP). I would like to know if there is a way to convert my .trr<br>
trajectories into these .cdr ones.<br>
Or, in case you have a better solution for my problem, like a<br>
different analysis tool or something like that, it would also be very<br>
helpful.<br>
Thank you advance<br>
Fabrício Bracht<br>
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