<div dir="ltr">Try combining indices with that, use "make_ndx -h". --Omer.<br clear="all"> <br>Koby Levy research group,<br>Weizmann Institute of Science. <br>FAX: 972-77-444-7905<br><a href="http://www.weizmann.ac.il/sb/faculty_pages/Levy/">http://www.weizmann.ac.il/sb/faculty_pages/Levy/</a><br>
<br><br><div class="gmail_quote">On Wed, Jul 22, 2009 at 18:27, Justin A. Lemkul <span dir="ltr"><<a href="mailto:jalemkul@vt.edu">jalemkul@vt.edu</a>></span> wrote:<br><blockquote class="gmail_quote" style="border-left: 1px solid rgb(204, 204, 204); margin: 0pt 0pt 0pt 0.8ex; padding-left: 1ex;">
The trjconv -pbc options were designed to fix this sort of issue.</blockquote></div><br></div>