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<p class=MsoNormal><font size=2 color=navy face=Arial><span style='font-size:
10.0pt;font-family:Arial;color:navy'>No, even I do not use mpi , the error is
still there.<o:p></o:p></span></font></p>
<p class=MsoNormal><font size=2 color=navy face=Arial><span style='font-size:
10.0pt;font-family:Arial;color:navy'><o:p> </o:p></span></font></p>
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<p class=MsoNormal><font size=2 color=navy face=Arial><span style='font-size:
10.0pt;font-family:Arial;color:navy'>Regards</span></font><font color=navy><span
style='color:navy'><o:p></o:p></span></font></p>
<p class=MsoNormal><font size=2 color=navy face=Arial><span style='font-size:
10.0pt;font-family:Arial;color:navy'>Yuguang</span></font><font color=navy><span
style='color:navy'><o:p></o:p></span></font></p>
<p class=MsoNormal><font size=3 color=navy face="Times New Roman"><span
style='font-size:12.0pt;color:navy'> <o:p></o:p></span></font></p>
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<p class=MsoNormal><b><font size=2 face=Tahoma><span style='font-size:10.0pt;
font-family:Tahoma;font-weight:bold'>From:</span></font></b><font size=2
face=Tahoma><span style='font-size:10.0pt;font-family:Tahoma'>
gmx-users-bounces@gromacs.org [mailto:gmx-users-bounces@gromacs.org] <b><span
style='font-weight:bold'>On Behalf Of </span></b>Yang Ye<br>
<b><span style='font-weight:bold'>Sent:</span></b> Wednesday, September 16,
2009 2:34 PM<br>
<b><span style='font-weight:bold'>To:</span></b> Discussion list for GROMACS
users<br>
<b><span style='font-weight:bold'>Subject:</span></b> Re: [gmx-users] compiling
problem</span></font><o:p></o:p></p>
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<p class=MsoNormal><font size=3 face="Times New Roman"><span style='font-size:
12.0pt'><o:p> </o:p></span></font></p>
<p class=MsoNormal style='margin-bottom:12.0pt'><font size=3
face="Times New Roman"><span style='font-size:12.0pt'>Is LAM-MPI's binary in
PATH? if you run mpicc from console, will it also show "No such file or
directory"? Check LAM-MPI installation.<br>
<br>
Regards,<br>
Yang Ye<o:p></o:p></span></font></p>
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<p class=MsoNormal><font size=3 face="Times New Roman"><span style='font-size:
12.0pt'>On Wed, Sep 16, 2009 at 12:39 PM, Mu Yuguang (Dr) <<a
href="mailto:YGMu@ntu.edu.sg">YGMu@ntu.edu.sg</a>> wrote:<o:p></o:p></span></font></p>
<p class=MsoNormal><font size=3 face="Times New Roman"><span style='font-size:
12.0pt'>Hi,<br>
I use<br>
git clone git://<a href="http://git.gromacs.org/gromacs.git" target="_blank">git.gromacs.org/gromacs.git</a><br>
<br>
to get the lastest version<br>
and<br>
./bootstrap<br>
<br>
To generate the configure file<br>
Then use ./configure successfully<br>
<br>
Howeve, after make<br>
The error appears as foloowing:<br>
<br>
<br>
mpicc -DHAVE_CONFIG_H -I. -<st1:place w:st="on">I.</st1:place>
-I../../../../src -I/usr/X11R6/include -I/usr/include/libxml2
-I../../../../include
-DGMXLIBDIR=\"/home/ygmu/software/gmx_cvs/gromacs/share/top\"
-I/home/ygmu/software/fftw-3.2/float/include -O3 -fomit-frame-pointer
-finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT
nb_kernel400_x86_64_sse.lo -MD -MP -MF .deps/nb_kernel400_x86_64_sse.Tpo -c
nb_kernel400_x86_64_sse.c -o nb_kernel400_x86_64_sse.o<br>
nb_kernel400_x86_64_sse.c: In function `nb_kernel400_x86_64_sse':<br>
nb_kernel400_x86_64_sse.c:93: warning: implicit declaration of function `_mm_castsi128_ps'<br>
nb_kernel400_x86_64_sse.c:93: error: invalid initializer<br>
nb_kernel400_x86_64_sse.c:94: error: invalid initializer<br>
nb_kernel400_x86_64_sse.c:95: error: invalid initializer<br>
mpicc: No such file or directory<br>
make[5]: *** [nb_kernel400_x86_64_sse.lo] Error 1<br>
<br>
Regards<br>
<br>
Yuguang<br>
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<p class=MsoNormal><font size=3 face="Times New Roman"><span style='font-size:
12.0pt'><br>
<br clear=all>
<br>
-- <br>
Regards,<br>
Yang Ye<o:p></o:p></span></font></p>
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