Just a work-around, force mpicc to point to cc. <br>alias mpicc=cc<br><br>Yang Ye<br><br><div class="gmail_quote">On Wed, Sep 16, 2009 at 5:35 PM, Mu Yuguang (Dr) <span dir="ltr"><<a href="mailto:YGMu@ntu.edu.sg">YGMu@ntu.edu.sg</a>></span> wrote:<br>
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<p><font color="navy" face="Arial" size="2"><span style="font-size: 10pt; font-family: Arial; color: navy;">No, even I do not use mpi , the error is
still there.</span></font></p>
<p><font color="navy" face="Arial" size="2"><span style="font-size: 10pt; font-family: Arial; color: navy;"> </span></font></p>
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<p><font color="navy" face="Arial" size="2"><span style="font-size: 10pt; font-family: Arial; color: navy;">Regards</span></font><font color="navy"><span style="color: navy;"></span></font></p>
<p><font color="navy" face="Arial" size="2"><span style="font-size: 10pt; font-family: Arial; color: navy;">Yuguang</span></font><font color="navy"><span style="color: navy;"></span></font></p>
<p><font color="navy" face="Times New Roman" size="3"><span style="font-size: 12pt; color: navy;"> </span></font></p>
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<hr width="100%" align="center" size="2">
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<p><b><font face="Tahoma" size="2"><span style="font-size: 10pt; font-family: Tahoma; font-weight: bold;">From:</span></font></b><font face="Tahoma" size="2"><span style="font-size: 10pt; font-family: Tahoma;">
<a href="mailto:gmx-users-bounces@gromacs.org" target="_blank">gmx-users-bounces@gromacs.org</a> [mailto:<a href="mailto:gmx-users-bounces@gromacs.org" target="_blank">gmx-users-bounces@gromacs.org</a>] <b><span style="font-weight: bold;">On Behalf Of </span></b>Yang Ye<br>
<b><span style="font-weight: bold;">Sent:</span></b> Wednesday, September 16,
2009 2:34 PM<br>
<b><span style="font-weight: bold;">To:</span></b> Discussion list for GROMACS
users<br>
<b><span style="font-weight: bold;">Subject:</span></b> Re: [gmx-users] compiling
problem</span></font></p>
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<p><font face="Times New Roman" size="3"><span style="font-size: 12pt;"> </span></font></p>
<p style="margin-bottom: 12pt;"><font face="Times New Roman" size="3"><span style="font-size: 12pt;">Is LAM-MPI's binary in
PATH? if you run mpicc from console, will it also show "No such file or
directory"? Check LAM-MPI installation.<br>
<br>
Regards,<br>
Yang Ye</span></font></p>
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<p><font face="Times New Roman" size="3"><span style="font-size: 12pt;">On Wed, Sep 16, 2009 at 12:39 PM, Mu Yuguang (Dr) <<a href="mailto:YGMu@ntu.edu.sg" target="_blank">YGMu@ntu.edu.sg</a>> wrote:</span></font></p>
<p><font face="Times New Roman" size="3"><span style="font-size: 12pt;">Hi,<br>
I use<br>
git clone git://<a href="http://git.gromacs.org/gromacs.git" target="_blank">git.gromacs.org/gromacs.git</a><br>
<br>
to get the lastest version<br>
and<br>
./bootstrap<br>
<br>
To generate the configure file<br>
Then use ./configure successfully<br>
<br>
Howeve, after make<br>
The error appears as foloowing:<br>
<br>
<br>
mpicc -DHAVE_CONFIG_H -I. -I.
-I../../../../src -I/usr/X11R6/include -I/usr/include/libxml2
-I../../../../include
-DGMXLIBDIR=\"/home/ygmu/software/gmx_cvs/gromacs/share/top\"
-I/home/ygmu/software/fftw-3.2/float/include -O3 -fomit-frame-pointer
-finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT
nb_kernel400_x86_64_sse.lo -MD -MP -MF .deps/nb_kernel400_x86_64_sse.Tpo -c
nb_kernel400_x86_64_sse.c -o nb_kernel400_x86_64_sse.o<br>
nb_kernel400_x86_64_sse.c: In function `nb_kernel400_x86_64_sse':<br>
nb_kernel400_x86_64_sse.c:93: warning: implicit declaration of function `_mm_castsi128_ps'<br>
nb_kernel400_x86_64_sse.c:93: error: invalid initializer<br>
nb_kernel400_x86_64_sse.c:94: error: invalid initializer<br>
nb_kernel400_x86_64_sse.c:95: error: invalid initializer<br>
mpicc: No such file or directory<br>
make[5]: *** [nb_kernel400_x86_64_sse.lo] Error 1<br>
<br>
Regards<br>
<br>
Yuguang<br>
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</div>
<p><font face="Times New Roman" size="3"><span style="font-size: 12pt;"><br><font color="#888888">
<br clear="all">
<br>
-- <br>
Regards,<br>
Yang Ye</font></span></font></p>
</div>
</div>
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Please don't post (un)subscribe requests to the list. Use the<br>
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Can't post? Read <a href="http://www.gromacs.org/mailing_lists/users.php" target="_blank">http://www.gromacs.org/mailing_lists/users.php</a><br></blockquote></div><br><br clear="all"><br>-- <br>Regards,<br>Yang Ye<br>