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Hi,<br><br>I guess the problem is in src/gmxlib/futil.c,<br>where several string buffers that contain the path are of size 512.<br>In Gromacs 4.1 they will be 4096.<br>You can try replacing all numbers 512 by 4096 in src/gmxlib/futil.c.<br><br>Berk<br><br>> From: alanwilter@gmail.com<br>> Date: Mon, 21 Sep 2009 13:59:54 +0100<br>> To: gmx-users@gromacs.org<br>> Subject: [gmx-users] problems trying to run gmx with the size of $PATH<br>> <br>> Hi There,<br>> <br>> I use Mac OSX 10.6.1 kernel 64 bits with Fink 64 bits.<br>> <br>> I have a long $PATH, with several paths for several applications. If I<br>> try 'grompp', is gives:<br>> <br>> grompp<br>> :-) G R O M A C S (-:<br>> <br>> [1] 33088 abort grompp<br>> <br>> It also happens if running SLeopard kernel 32 bits.<br>> <br>> When I made my path shorter (keeping just the essential /usr/bin,<br>> /sw/bin, /usr/local/bin etc.), 'grompp' worked fine.<br>> <br>> Does anyone know if there's a limit for $PATH? or why gromacs in<br>> particular would be affected? Because so far I got only gromacs<br>> complaining and even though when I was using 10.5.8 (Leopard, 32 bits)<br>> my $PATH was as big as it is and I didn't have problem then.<br>> <br>> Many thanks in advance,<br>> <br>> Alan<br>> _______________________________________________<br>> gmx-users mailing list gmx-users@gromacs.org<br>> http://lists.gromacs.org/mailman/listinfo/gmx-users<br>> Please search the archive at http://www.gromacs.org/search before posting!<br>> Please don't post (un)subscribe requests to the list. Use the <br>> www interface or send it to gmx-users-request@gromacs.org.<br>> Can't post? Read http://www.gromacs.org/mailing_lists/users.php<br> <br /><hr />What can you do with the new Windows Live? <a href='http://www.microsoft.com/windows/windowslive/default.aspx' target='_new'>Find out</a></body>
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