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Hi,<br><br>If you use -pi with g_mindist, all the other output options are ignored.<br><br>Berk<br><br>> Date: Fri, 9 Oct 2009 14:24:00 +0200<br>> From: cseifert@bph.ruhr-uni-bochum.de<br>> To: gmx-users@gromacs.org<br>> Subject: [gmx-users] g_mindist<br>> <br>> Dear Mr. Gromacs, ;-)<br>> and hello to everybody!<br>> <br>> When I use g_mindist with a Syntax like this:<br>> g_mindist -f ./prot.xtc -s ./prot.tpr -n ./prot.ndx<br>> -od ./protein_self.xvg -o prot.out -pi<br>> <br>> Then I just get the xvg file with the distance of the group (I selected<br>> C-alphas) with its periodic image. The xvg file look familiar and<br>> correct, but the prot.out file is not created. There is no warning or<br>> error.<br>> <br>> I used g_mindist v4.0.5.<br>> <br>> Greetings,<br>> Christian<br>> <br>> -- <br>> M.Sc. Christian Seifert<br>> Department of Biophysics<br>> University of Bochum<br>> ND 04/67<br>> 44780 Bochum<br>> Germany<br>> Tel: +49 (0)234 32 28363<br>> Fax: +49 (0)234 32 14626<br>> E-Mail: cseifert@bph.rub.de<br>> Web: http://www.bph.rub.de<br>> <br>> _______________________________________________<br>> gmx-users mailing list gmx-users@gromacs.org<br>> http://lists.gromacs.org/mailman/listinfo/gmx-users<br>> Please search the archive at http://www.gromacs.org/search before posting!<br>> Please don't post (un)subscribe requests to the list. Use the <br>> www interface or send it to gmx-users-request@gromacs.org.<br>> Can't post? Read http://www.gromacs.org/mailing_lists/users.php<br>                                            <br /><hr />See all the ways you can stay connected <a href='http://www.microsoft.com/windows/windowslive/default.aspx' target='_new'>to friends and family</a></body>
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