Hi,<br><br>This is strange, 'cause on the site under installing (using MPI) it is written "<i>In GROMACS 4.x, some of the utility programs are also MPI-aware, but these will only be for compute-intensive utilities (e.g. that diagonalize large matrices, or calculate autocorrelations, etc.).</i>". <br>
So I guess there are more parallel things then just MD.<br><br>Cheers,<br>Itamar<br><br>On Wed, Oct 14, 2009 at 10:48 AM, Mark Abraham <<a href="mailto:Mark.Abraham@anu.edu.au">Mark.Abraham@anu.edu.au</a>> wrote:<br>
> Itamar Kass wrote:<br>>><br>>> Hi,<br>>><br>>> I wonder if there a way to run g_cover in paralel in order to make<br>>> things run faster?<br>><br>> No. Obviously you can use -dt to reduce the number of frames you analyze.<br>
><br>>> Also, what analysis programs can run in parallel?<br>><br>> None in 4.0.x. Not sure about future plans.<br>><br>> Matk<br>> _______________________________________________<br>> gmx-users mailing list <a href="mailto:gmx-users@gromacs.org">gmx-users@gromacs.org</a><br>
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