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You could get better help if you tell us what information you want to get out of this analysis.<br><br>NMA gives you a harmonic description of the potential energy around a minimum of the system.<br>For water the minimum is ice, so you would get the modes of a certain ice state.<br><br>Berk<br><br><hr id="stopSpelling">Date: Tue, 20 Oct 2009 19:20:19 +0530<br>From: simoniitchem@gmail.com<br>To: gmx-users@gromacs.org<br>Subject: [gmx-users] Normal mode analysis of pure water<br><br>Hi Berk,<br> You mentioned that standard NMA techniques will not work for the liquid water system. Could you suggest the alternatives then?<br> <br /><hr />Express yourself instantly with MSN Messenger! <a href='http://clk.atdmt.com/AVE/go/onm00200471ave/direct/01/' target='_new'>MSN Messenger</a></body>
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