<br><br><div class="gmail_quote">---------- Forwarded message ----------<br>From: <b class="gmail_sendername">leila karami</b> <span dir="ltr"><<a href="mailto:karami.leila1@gmail.com">karami.leila1@gmail.com</a>></span><br>
Date: Tue, Nov 3, 2009 at 1:50 PM<br>Subject: grompp<br>To: <a href="mailto:gmx-users@gromacs.org">gmx-users@gromacs.org</a><br><br><br>Hi<br><br>I used grompp command ( grompp -f -c o -p c -o t.tpr) but a mdout.mdp file is created and follow fatal error appeared:<br>
<br>Atom index (1) in settles out of bounds (1-0).<br>This probably means that you have inserted topology section "settles" in a part belonging to a different molecule than you intended to.<br>
In that case move the "settles" section to the right molecule.<br><br>please guide me<br><br>
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