Thanks for your help.<br>I have tried the command<br><br>trjconv -f traj.trr -s AFP-500ps.tpr -b 87001 -e 99000 -o test.gro<br><br>but nothing was written on output file(test.gro) and got the message<br><br>"WARNING no output, trajectory ended at 500"<br>
<br>Am i doing it right? <br><br><br><div class="gmail_quote">On Thu, Dec 10, 2009 at 8:08 PM, Justin A. Lemkul <span dir="ltr"><<a href="mailto:jalemkul@vt.edu">jalemkul@vt.edu</a>></span> wrote:<br><blockquote class="gmail_quote" style="border-left: 1px solid rgb(204, 204, 204); margin: 0pt 0pt 0pt 0.8ex; padding-left: 1ex;">
<div><div></div><div class="h5"><br>
<br>
Ramachandran G wrote:<br>
<blockquote class="gmail_quote" style="border-left: 1px solid rgb(204, 204, 204); margin: 0pt 0pt 0pt 0.8ex; padding-left: 1ex;">
Dear gromacs users:<br>
Can any one tell me how can i split a trajectory file from a specific time interval of my interest.<br>
For example if i have a trajectory file up to 0-100ps, and my interest is to consider part of the trajectory from 50-75ps,<br>
how i can go about it either by splitting the trajectory file. Thanks for your help<br>
<br>
</blockquote>
<br></div></div>
Make use of the -b and -e flags, which should be present in all of the analysis tools.<br>
<br>
-Justin<br>
<br>
<blockquote class="gmail_quote" style="border-left: 1px solid rgb(204, 204, 204); margin: 0pt 0pt 0pt 0.8ex; padding-left: 1ex;">
Rama<br>
<br>
<br>
</blockquote>
<br>
-- <br>
========================================<br>
<br>
Justin A. Lemkul<br>
Ph.D. Candidate<br>
ICTAS Doctoral Scholar<br>
MILES-IGERT Trainee<br>
Department of Biochemistry<br>
Virginia Tech<br>
Blacksburg, VA<br>
jalemkul[at]<a href="http://vt.edu" target="_blank">vt.edu</a> | (540) 231-9080<br>
<a href="http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin" target="_blank">http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin</a><br>
<br>
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</font></blockquote></div><br><br clear="all"><br>-- <br>Postdoctoral Research Scholar,<br>Department of Chemistry,<br>University of Nevada, Reno.<br>