<table cellspacing="0" cellpadding="0" border="0" ><tr><td valign="top" style="font: inherit;"><DIV>Hi Justin,</DIV>
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<DIV>I study on md simulations of hydrocarbons and I want to apply an electrical field in one direction in my md simulations. Is it possible to do this in Gromacs ? and generally what can be done to simulation system about non-equilibrium MD in Gromacs ? I didn't find any information about this issue. So I will be very happy if you provide me some information <BR>about non-equilibrium MD ?</DIV>
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<DIV>Best regards</DIV>
<DIV> </DIV>
<DIV><BR>--- On <B>Mon, 2/1/10, Justin A. Lemkul <I><jalemkul@vt.edu></I></B> wrote:<BR></DIV>
<BLOCKQUOTE style="BORDER-LEFT: rgb(16,16,255) 2px solid; PADDING-LEFT: 5px; MARGIN-LEFT: 5px"><BR>From: Justin A. Lemkul <jalemkul@vt.edu><BR>Subject: Re: [gmx-users] non-equilibrium MD simulations<BR>To: "Discussion list for GROMACS users" <gmx-users@gromacs.org><BR>Date: Monday, February 1, 2010, 7:08 AM<BR><BR>
<DIV class=plainMail><BR><BR>oguz gurbulak wrote:<BR>> Dear All,<BR>> I'm searching for a non-equilibrium MD tutorial done with Gromacs. Could you please help me to find a NEMD tutorial ?<BR>> <BR><BR>"Non-equilibrium" can encompass a variety of topics, so if you want specific advice, you'll have to be more specific. And, as I just mentioned to someone else:<BR><BR><A href="http://lists.gromacs.org/pipermail/gmx-users/2010-February/048498.html" target=_blank>http://lists.gromacs.org/pipermail/gmx-users/2010-February/048498.html</A><BR><BR>-Justin<BR><BR>> Thank in advance .<BR>> <BR>> <BR><BR>-- ========================================<BR><BR>Justin A. Lemkul<BR>Ph.D. Candidate<BR>ICTAS Doctoral Scholar<BR>MILES-IGERT Trainee<BR>Department of Biochemistry<BR>Virginia Tech<BR>Blacksburg, VA<BR>jalemkul[at]vt.edu | (540) 231-9080<BR><A href="http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin"
target=_blank>http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin</A><BR><BR>========================================<BR>-- gmx-users mailing list <A href="http://us.mc363.mail.yahoo.com/mc/compose?to=gmx-users@gromacs.org" ymailto="mailto:gmx-users@gromacs.org">gmx-users@gromacs.org</A><BR><A href="http://lists.gromacs.org/mailman/listinfo/gmx-users" target=_blank>http://lists.gromacs.org/mailman/listinfo/gmx-users</A><BR>Please search the archive at <A href="http://www.gromacs.org/search" target=_blank>http://www.gromacs.org/search</A> before posting!<BR>Please don't post (un)subscribe requests to the list. Use the www interface or send it to <A href="http://us.mc363.mail.yahoo.com/mc/compose?to=gmx-users-request@gromacs.org" ymailto="mailto:gmx-users-request@gromacs.org">gmx-users-request@gromacs.org</A>.<BR>Can't post? Read <A href="http://www.gromacs.org/mailing_lists/users.php"
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