Hi all,<br><br>i used united the atom force field model for the membrane lipids . to calculate order parameter i used :<br>g_order -od -d <br> <br> i know united atom force field doesn't have hydrogen atoms in hydrocarbons chains .<br>
i want to know gromacs calculates order parameter <b> Sc-c</b> or <b>Sc-d</b> (Deuterium) ? <br><br clear="all"> in the output is written: title "Deuterium order parameters"<br><br>thanks in advance,<br>Afsaneh <br>