Hi E R Azhagiya singam,<br><br>You first have to ask yourself whether you're up to it. This is considered an advanded topic. In particular for groups like these. To start with, do you know the protonation state of the Zn(Cys)4 group in your case? <br>
<br>Cheers,<br><br>Tsjerk<br><br><div class="gmail_quote">On Fri, Feb 19, 2010 at 9:14 AM, babu gokul <span dir="ltr"><<a href="mailto:bbgkl@yahoo.co.in">bbgkl@yahoo.co.in</a>></span> wrote:<br><blockquote class="gmail_quote" style="border-left: 1px solid rgb(204, 204, 204); margin: 0pt 0pt 0pt 0.8ex; padding-left: 1ex;">
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<div>Dear all<br>I would like to simulate the molecule which consist of a zn atom coordinated to four CYS residue. I would like to know how to insert the parameters for zn coordination. As I am new to Gromacs I would like to have detailed description.I would like to use OPLS force field. <br>
Thanking you<br>E R Azhagiya singam</div></td></tr></tbody></table><br><div class="hm">
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